FastQCFastQC Report
Wed 31 May 2023
EGAF00007938768

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938768
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences407789
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10010.24547008379333432No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9420.23100181711620468No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7900.19372763855817593No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4320.10593713905966075No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)