FastQCFastQC Report
Sat 11 May 2024
EGAF00007940574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007940574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11454334
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length146
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG225760.19709570194129136No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)