FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007940691

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007940691
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences427660
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT45831.071645699855025No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA31270.7311883271757939No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT24160.564934761258944No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG21660.5064771079829772No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG19670.4599448159753075No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC17790.4159846607117804No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG14970.35004442781648976No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG14160.3311041481550765No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG13970.326661366506103No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12830.3000046766122621No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG12580.2941589112846654No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA12270.28691016227844546No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC9320.21793013141280454No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8970.2097460599541692No Hit
ATTGAGCAGAAACAGCTGCTGCAGGGTGATG8530.19945751297759906No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC8280.19361174765000236No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8160.1908057802927559No Hit
CAGAAACAGCTGCTGCAGGGTGACGTGGAAG7960.18612916803067855No Hit
GAGAAAACGAAACAGACTCTGGCTTCTGTTT6520.15245755974372166No Hit
GTTGCACGCGTCGCCGACACCCTGCCAACGG6140.14357199644577467No Hit
GCGTCTCGCGTACTGGAAGGTACTAAAAAGG6130.1433381658326708No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5770.13492026376093158No Hit
AACGGTGACATGGCTACCGGCTGGGTGAAGG4960.1159799840995183No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC4460.10428845344432491No Hit

[OK]Adapter Content

Adapter graph