FastQCFastQC Report
Sun 21 May 2023
EGAF00007940705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007940705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462994
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64351.389866823328164No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10160.2194412886560085No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC9950.21490559272906345No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9430.20367434567186618No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG9150.19762675110260608No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6470.1397426316539739No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6040.1304552542797531No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5410.11684816649891791No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)