FastQCFastQC Report
Sun 21 May 2023
EGAF00007940737

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007940737
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences487076
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC20610.4231372516814625No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT10940.224605605696031No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTACC8030.16486133580796428No Hit
AACGGTGACATGGCTACCGGCTGGGTGAAGGAT7110.1459731130254827No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5500.1129187231561399No Hit
CAGGGCCGTTATACTACCAACGACGGTTACGTT5150.10573298622802191No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)