FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007940743

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007940743
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464409
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22250.47910354881150025No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG15860.34150931614159075No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT8300.1787217732645147No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG7910.17032400319545918No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCACC6970.1500832240546587No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA5320.11455419683942386No Hit
ACTAGCCCGGAAGAACCGATCTACACCCAGGTG4800.1033571700806832No Hit
GAAGAGGAAGATGACGACTCCAGCGATACTGGT4750.10228053289234275No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)