FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007940823

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007940823
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences396107
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG53351.3468582983890718No Hit
ATCGAAGTGATTGACGTTGAAACCACTGAAG22620.5710578202354415No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA21010.5304122370975519No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14160.35747916598292884No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC10040.2534668662760315No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC7520.1898476926689001No Hit
ACTAGCGAACCGTGCGAAGCGCTGGACCTGT6050.15273650806474007No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5400.13632680058671018No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5020.12673343313801574No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4280.10805161231687399No Hit
CACCCAGGTGTGCCGGTCTCTCCAGCCGTTA4100.1035073856306503No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)