FastQCFastQC Report
Sun 21 May 2023
EGAF00007940849

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007940849
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences520906
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11020.2115544839184037No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8990.17258392109132933No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7150.13726084936629643No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6990.13418927791194574No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5810.11153643843610939No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)