FastQCFastQC Report
Wed 31 May 2023
EGAF00007940897

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007940897
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences547985
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT52010.9491135706269332No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47040.8584176574176301No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA20080.36643338777521284No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14210.25931366734490907No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG12140.22153891073660778No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC11170.20383769628730714No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG10270.18741388906630657No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA10090.18412912762210643No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC9770.17828955172130623No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA9770.17828955172130623No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA9640.17591722401160617No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG9580.1748223035302061No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC9370.17099008184530598No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG9060.16533299269140578No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8560.15620865534640546No Hit
ACCGCATCCGGTGAAGAAGTAGCTGTTCTGT8550.15602616859950547No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7870.14361706981030503No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7860.143434583063405No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7650.13960236137850487No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6060.11058696862140387No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5890.10748469392410376No Hit

[OK]Adapter Content

Adapter graph