FastQCFastQC Report
Sun 21 May 2023
EGAF00007940907

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007940907
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences564628
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45650.8084969218671408No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10500.18596314741741465No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8070.14292596187224155No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA7920.1402693454805642No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG7750.13725851356999652No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA7300.12928866439496448No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6350.11246342724767458No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5850.10360803927541673No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5820.10307671599708125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)