FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007941007

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941007
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences473526
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43940.9279321515608436No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7910.16704468181261428No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5740.12121826467818028No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5350.11298218049272903No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5270.1112927273264826No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5200.10981445580601698No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)