FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007941027

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941027
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451094
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42480.9417105969044146No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8630.19131267540689967No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5570.1234775900366664No Hit
ATGTCTTCTCGCCGCCGTAGCTCTTCCCGTC5410.11993065746828821No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5220.11571867504333909No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4760.10552124390925174No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)