FastQCFastQC Report
Sun 21 May 2023
EGAF00007941031

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941031
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472158
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43290.9168541039228394No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA31770.6728679806336015No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19220.40706712583499594No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA15340.32489124403271785No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA14140.29947602285675556No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC9710.20565149801549482No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG9470.20056845378030236No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA9330.19760334464310678No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG8770.18574290809432434No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG8550.18108345087873126No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA8540.18087165736893157No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8430.17854192876113503No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT7380.15630361023216804No Hit
ACCGCATCCGGTGAAGAAGTAGCTGTTCTGT6840.14486676070298501No Hit
GGTTGCCCGCTGCCGCCGCCGCGTTCCCCGC6590.13957192295799287No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA6140.13004121501700702No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA6060.12834686693860953No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA5540.11733360442902588No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC5450.1154274628408287No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5110.1082264835076394No Hit
GCCGTCCGTTATTTCCGCGGCCGCGGCTCCG5030.1065321354292419No Hit

[OK]Adapter Content

Adapter graph