FastQCFastQC Report
Sun 21 May 2023
EGAF00007941057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences444754
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA24910.5600849008665465No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16610.37346488170988906No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA13640.30668639292732613No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA13540.30443795896158327No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG10850.24395508528310034No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9170.20618139465862026No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG7740.17402878894849735No Hit
CCGACCAGCGGTCCGCTGAACATCCCGCAAC6680.15019538891162307No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6490.1459233643767116No Hit
CCGCAGCAGCAGCAGCGCCACGCGGCTTTCT5890.13243276058225445No Hit
ATGATGGACCCGAACTCTACCAGCGAAGACG5190.11669372282205442No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)