FastQCFastQC Report
Sun 21 May 2023
EGAF00007941059

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941059
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences422940
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43751.0344256868586559No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8330.1969546507778881No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG7940.1877334846550338No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG7830.1851326429280749No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6150.1454106965527025No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG4780.1130183950442143No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4460.10545231002033387No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4260.10072350688040857No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)