FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007941075

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941075
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences511961
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT28980.5660587427557958No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA27840.5437914216121932No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT16990.3318612159910618No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14360.2804901154580134No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG13170.2572461574221474No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG12780.24962838966249382No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA11110.21700871746090034No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA7810.152550682571524No Hit
TCCTGCGATCGTTGCTGTCCGGGCTACCACC7510.14669086121794433No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT7380.14415160529805982No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6310.12325157580362565No Hit
CGTGAAGCTCTGGATGCGCTGGCGGAGTCTA5750.11231324261027696No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)