FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007941083

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941083
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455738
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG38710.8493915363651923No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA38610.8471972931816087No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA16490.3618307009729274No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG16110.35349257687530994No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC15990.3508594850550097No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15070.330672447766041No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA12460.27340270067451033No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT12040.26418687930345947No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA8890.1950682190205776No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC8570.18804664083311026No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG8210.18014736537220946No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG8190.17970851673549276No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7160.1571078119445822No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC6110.13406825851695492No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5850.12836322623963767No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG5580.1224387696439621No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5370.11783085895843665No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5360.11761143464007828No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT4760.104445975538577No Hit
CGTTCTCGCCACGAGAACACCTCTCAGGTTC4690.10291000531006851No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4570.10027691348976824No Hit

[OK]Adapter Content

Adapter graph