FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007941085

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941085
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences524776
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14850.2829778800859795No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA13030.2482964159946339No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC5560.10594996722411087No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5440.10366327728402212No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)