FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007941097

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941097
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences484306
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA20240.417917597551961No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13730.2834984493274913No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8260.17055332785470342No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7390.15258947855281577No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6650.13730988259488836No Hit

[OK]Adapter Content

Adapter graph