FastQCFastQC Report
Sun 21 May 2023
EGAF00007941121

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941121
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472797
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG31310.6622292442633942No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22120.46785406844798083No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC10210.21594891676554628No Hit
GATGAACGTAAACGCCACACCAAAATCCACCTG5910.1250007931522408No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT5900.12478928588802382No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT5460.11548296626247628No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)