FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007941131

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941131
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462386
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21560.46627709316458543No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG16990.36744192081940197No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT12470.2696880960928748No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC10100.21843221896856738No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG9280.20069811802260448No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC8280.179071165649479No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC8200.17734100945962897No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT7550.16328349041709742No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC7100.15355136184919094No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGCTG6300.13624979995069056No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT4660.10078159805876476No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)