FastQCFastQC Report
Sun 21 May 2023
EGAF00007941140

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941140
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences476108
Sequences flagged as poor quality0
Sequence length41
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGT11820.24826299915145303No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATAT5630.1182504809833063No Hit
AGACGCTGCGGAGGTCGGAGCAACAGCCGGATCCGGTTTAC5500.11552000806539693No Hit
GCTGGCAGCGGAGGTAGGTGCTACCGCCGGGTCCGGCTTAC5350.11236946239088609No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)