FastQCFastQC Report
Sun 21 May 2023
EGAF00007941149

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941149
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences476506
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23020.48309989800758024No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG8320.17460430718605852No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT6390.13410114458160025No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT5120.10744880442218986No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5040.10576991685309314No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)