FastQCFastQC Report
Sun 21 May 2023
EGAF00007941153

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941153
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences476100
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG26290.5521949170342365No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT10480.22012182314639783No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC6270.13169502205419029No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC5970.12539382482671707No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5680.1193026675068263No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5540.11636210880067213No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT5410.11363159000210041No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC5300.11132115101869355No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)