FastQCFastQC Report
Sun 21 May 2023
EGAF00007941185

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941185
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences522403
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24580.4705179717574363No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG18590.3558555368173613No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC15100.2890488760592876No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT12960.2480843333594945No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT10080.19295448150182906No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG9930.19008313505090899No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC9310.17821490305377266No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGGAA8810.1686437482173724No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT8110.15524413144641205No Hit
TCTACCGAAAGCGTTGACAAAAACTTTGTTGTG7720.14777863067401986No Hit
GCGGAAGTGAATGTTGACCAGGCTCACCTGGTA7650.14643866899692382No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT7470.14299305325581974No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC6560.1255735514535713No Hit
GAAGCAACTATCAAAAAAGAACAGAAGCTGATC6290.12040512784191515No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG6220.11906516616481912No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGGCC6170.11810805068117908No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCTAC5920.11332247326297896No Hit
CACGAAGCTCCGAACATGACCCAGACCGGTACC5790.1108339730055149No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT5710.10930258823169087No Hit
CAGGGCCGTTATACTACCAACGACGGTTACGTT5630.10777120345786682No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAACTG5550.1062398186840428No Hit

[OK]Adapter Content

Adapter graph