FastQCFastQC Report
Sun 21 May 2023
EGAF00007941203

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941203
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences567752
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28740.5062069354225084No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15090.2657850610830081No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13150.2316152122757824No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8050.14178725922585916No Hit
ATGAACCCAAACGATCTGGCAGATGAACTGG6100.10744127717735913No Hit
ATGACCAGCCTGCAGCTGCCGTCCTCCCCGA5990.10550381152334116No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)