FastQCFastQC Report
Sun 21 May 2023
EGAF00007941217

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941217
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences501185
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG18340.36593273940760396No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14440.28811716232528906No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7920.15802547961331645No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7150.14266189131757734No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6160.12290870636591279No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)