FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007941245

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941245
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences448353
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT67961.5157699402033664No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG62111.385292392378327No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT20570.45879028354890006No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC16980.37871944650755096No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG10840.24177378092708202No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC10330.23039881521925804No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG9030.20140380459147145No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG9020.20118076604818078No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8370.18668326073428748No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC7940.17709260337278884No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7710.17196271687710354No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG7500.16727890746799956No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG7110.15858040427966358No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC6880.15345051778397825No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6440.14363682187918894No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG6110.13627654995059696No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6100.13605351140730632No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA6080.13560743432072497No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAAC5610.12512462278606365No Hit
CAGGACTCTCTGCCGGACACTAAAGCCTCTG5250.11709523522759968No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5110.11397269562153035No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG5050.11263446436178637No Hit
GTGGTAGAAATGGAGGGTTACCGTTACGTGG4820.10750457786610104No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4620.10304380700028773No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)