FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007941293

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941293
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences471979
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50261.0648778865161375No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT29450.6239684392737812No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8240.17458403869663694No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8070.17098218352935196No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7470.15826975352716965No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6210.13157365052258682No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4920.10424192601789486No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)