FastQCFastQC Report
Wed 31 May 2023
EGAF00007941295

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941295
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences437523
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45891.0488591456906264No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7250.16570557433552066No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5380.12296496412760015No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4490.10262317638158451No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)