FastQCFastQC Report
Sun 21 May 2023
EGAF00007941305

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941305
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences397586
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42201.0614055826915434No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14810.37249802558440187No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9840.24749362402096653No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC9410.23667835386557878No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG8550.21504781355480324No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7370.18536870010513448No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT6550.16474423143672062No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5620.1413530657518122No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5280.13280145679173816No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5010.12601047320579697No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4960.12475288365284493No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA4770.11997404335162708No Hit
GCGGAAGTGAATGTTGACCAGGCTCACCTGG4750.11947100753044625No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC4700.11821341797749417No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG4690.11796190006690375No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC4540.11418913140804757No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA4510.11343457767627632No Hit
GTAGGCTCCGTGTTCAAAGAAATCATTAACC4090.10287082543147899No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA4080.10261930752088856No Hit
GCACTGGTAAGCGCTATGGAACGTACTGAAC3980.10010412841498444No Hit

[OK]Adapter Content

Adapter graph