FastQCFastQC Report
Wed 31 May 2023
EGAF00007941311

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941311
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences521515
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14400.2761186159554375No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC12920.247739758204462No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC9650.18503782249791473No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG9600.18407907730362502No Hit
CAGAACCTGACCCTGCGTATCCAGGTTTCTA8780.1683556561172737No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG8580.16452067534011486No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG8560.16413717726239896No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC8310.1593434512909504No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT7630.1463045166486103No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA7430.14246953587145145No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAAC7120.13652531566685522No Hit
ATGGCACGTCGCCTGCCGAAACCGACTCTGC6770.12981409930682722No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6200.11888440409192448No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6180.11850090601420861No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG6150.11792565889763477No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6130.1175421608199189No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5880.11274843484847033No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5720.10968045022674323No Hit
GGCACTTCCGCTTTCGGTGATTCCGCGGACC5710.10948870118788531No Hit
CGTGACACCACTCACATTTCCCAGAGCGCAC5620.10776295983816382No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG5570.1068042146438741No Hit
CAGGACTCTCTGCCGGACACTAAAGCCTCTG5530.10603721848844233No Hit

[OK]Adapter Content

Adapter graph