FastQCFastQC Report
Sun 21 May 2023
EGAF00007941333

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941333
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences528145
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT40220.7615332910469663No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13820.26167056395497446No Hit
ACCGGCATCGTGAACGGTATGGATGTTTCCG10030.1899099679065408No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9800.18555510323869392No Hit
ACTGGTATCGTAAACGGCATGGATGTTTCCG9110.17249050923515324No Hit
CCGCCGCGCACCCCTACCTGGGAATCCCCGG7380.13973435325526135No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7330.13878764354485984No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6960.13178199168788876No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6950.13159264974580845No Hit
ATCACTGGCATTGTCAACGGTATGGATGTAT6010.11379450719026026No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5980.11322648136401935No Hit
ACTGGTATCACCGGTATTGTTAACGGCATGG5750.10887161669617246No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)