FastQCFastQC Report
Sun 21 May 2023
EGAF00007941395

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941395
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433883
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46621.0744832132164661No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27370.6308152197712287No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA16770.38650972727670824No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG13840.3189800015211474No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG10480.24153976993797868No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG9790.22563686523786367No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8970.20673776110149508No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8450.1947529633564809No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7790.17954148929550132No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC7710.17769767425780683No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG7700.17746719737809502No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7350.1694005065881816No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6810.15695475508374376No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6710.15464998628662566No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAAC6170.14220423478218783No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG6150.1417432810227642No Hit
AATGGCGACACCACCATCAACGGTCAGCTGA6050.13943851222564607No Hit
ATTGAGCAGAAACAGCTGCTGCAGGGTGATG5370.1237660844052429No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5260.12123083872841295No Hit
CAGGACTCTCTGCCGGACACTAAAGCCTCTG5230.12053940808927752No Hit
GTTGCACGCGTCGCCGACACCCTGCCAACGG5050.1163908242544649No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC4800.11062890226166962No Hit
ATGGGTCGCGTAGCAGACACTATCGCTCGTG4520.10417554962973889No Hit
GAAAGCGTCGAACGTGCTATGGGTCGTGTTG4420.10187078083262079No Hit

[OK]Adapter Content

Adapter graph