FastQCFastQC Report
Sun 21 May 2023
EGAF00007941399

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941399
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences447641
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT55421.2380456660582924No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47151.0532994073375763No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA23600.5272081869176416No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC18060.40344829897172063No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA12530.2799118043253411No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG11880.2653912398551518No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA11520.2573490810716623No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10000.22339329954137355No Hit
CGCGAAATGATCCGTTATATGGCACTGGTTT8700.194352170600995No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG8580.19167145100649852No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7580.16933212105236115No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7490.1673215813564888No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7470.16687479475740605No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7270.16240692876657858No Hit
GCACTGGTAAGCGCTATGGAACGTACTGAAC6720.15012029729180304No Hit
GTTGCGACCCCACACGCCTCCGCGCGCGCTC6630.14810975759593067No Hit
TCCTCCAACAGCCCGCACGTGGTTAAAACCG6080.13582312612115513No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4960.1108030765725213No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4690.1047714574849042No Hit
TCTACCGAAAGCGTTGACAAAAACTTTGTTG4560.10186734459086634No Hit
ACCCAGGGCGAAGTAAACGTGACGGGTGTTA4500.1005269847936181No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4490.10030359149407672No Hit

[OK]Adapter Content

Adapter graph