FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007941409

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941409
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences417023
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT47791.1459799579399699No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21380.5126815547343911No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG11870.2846365787978121No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10040.24075410708761869No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG9960.23883574766859383No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG9620.23068272013773822No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC9240.22157051289737018No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG6850.16425952525400278No Hit
GCTCCGACCAGCGCGGCGTCTCGCAAACCTG6710.1609023962707093No Hit
CGTGACACCACTCACATTTCCCAGAGCGCAC5280.1266117216556401No Hit
GTGGCAACCAACGAAATGAAGGTTATCAACG5120.1227750028175904No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5070.12157602818069987No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC5060.12133623325332175No Hit
TCCTACACCAACGGCAAACTGACTATCACCC4930.11821889919740637No Hit
GGCCTGACTTCTTATGATGAACCGCTGGTTA4830.11582094992362531No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA4680.11222402601295373No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGG4660.11174443615819751No Hit
GATATTCGTGTTTACGGCATGAACGGCTGCA4640.1112648463034413No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG4630.11102505137606318No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4470.10718833253801349No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAAC4410.10574956297374485No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC4380.10503017819161055No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG4260.10215263906307326No Hit

[OK]Adapter Content

Adapter graph