FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007941447

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941447
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences372541
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7250.19460945238242233No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5740.15407700092070403No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5050.13555554959051488No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4360.11703409826032572No Hit

[OK]Adapter Content

Adapter graph