FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007941453

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941453
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences376250
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG34140.907375415282392No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8510.22617940199335548No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7030.186843853820598No Hit
GTTGCGACCCCACACGCCTCCGCGCGCGCTC4340.11534883720930234No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA3990.10604651162790697No Hit
ATCCAGGGCAAACTGGAATACCGTCACACCT3900.10365448504983388No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)