FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007941481

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941481
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences461272
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG68471.4843736450510763No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT25790.5591061239355521No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC11570.2508281447822543No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10100.21895974609341126No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5270.11424929325864132No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG4640.10059140810628002No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)