FastQCFastQC Report
Wed 31 May 2023
EGAF00007941491

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941491
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences486478
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG31840.6545003062831207No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8390.17246411965186503No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8260.16979185081339754No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7110.14615254955003104No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6590.13546347419616098No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5620.1155242374783649No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)