FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007941515

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941515
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences494154
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT51881.0498751401384994No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30900.6253111378234316No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA17170.3474625319232466No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC12540.2537670442817421No Hit
TCTGGCTACGAAATTGACCACATCGACCTGG9640.19508088571578902No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8460.1712016901613667No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7580.15339347652756022No Hit
GGTCAGAAAGGTGGCGCGCAGAAGTCCCAGA7200.14570356609478016No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA6610.133763968317569No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6300.12749062033293262No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)