FastQCFastQC Report
Wed 31 May 2023
EGAF00007941559

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941559
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences518163
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50460.9738248389020444No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17580.33927547895160404No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8890.17156763412285322No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT7760.14975982461117449No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5650.10903904755839378No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)