FastQCFastQC Report
Wed 31 May 2023
EGAF00007941567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences502469
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12880.2563342216136717No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11560.23006394424332646No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8370.16657744059832547No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7530.14985999136265124No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5760.11463393761605194No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)