FastQCFastQC Report
Sun 21 May 2023
EGAF00007941569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences511942
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT52911.0335155154294822No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA25840.5047446781080669No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15290.298666645830973No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12600.2461216309660079No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC11960.23362021478995665No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA10520.20549202839384148No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA10030.1959206316340523No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5600.10938739154044794No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)