FastQCFastQC Report
Wed 31 May 2023
EGAF00007941576

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941576
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467791
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCTGGGAACGTGGGGTCCACGGGCCTGCATAACCCGGGTAGG8250.17636081070392548No Hit
CGGCGGCGGTTCCTGATAACCCTGGTACGGGGCTTGCGGAGCCG8010.17123031439253855No Hit
TGGCGGCGGTTCCTGGTAGCCCTGATACGGTGCCTGCGGCGCCG7970.17037523167397406No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT7810.16695490079971612No Hit
GTGCTGGCTACGCGGGGTCCACGGACCAGCATAGCCCGGGTAGG6700.1432263553595516No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA6070.1297588025421609No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA5170.11051944137445996No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)