FastQCFastQC Report
Wed 31 May 2023
EGAF00007941577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467791
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47291.010921544022865No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12910.27597794741668824No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC8490.1814913070153124No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC8450.1806362242967479No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC8380.17913982953926005No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC8140.17400933322787313No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8030.1716578557518208No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)