FastQCFastQC Report
Sun 21 May 2023
EGAF00007941605

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941605
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences406591
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40901.00592487290668No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8770.21569587128096784No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7190.17683618181415722No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4740.11657906840043188No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4410.1084628041447056No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)