FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007941635

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007941635
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences288437
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7450.2582886384201749No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC3660.1268907941768913No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG3490.12099695947468599No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG3450.11961017483887297No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)