FastQCFastQC Report
Wed 31 May 2023
EGAF00007942222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences372065
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT24240.6514990660234099No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA20010.5378092537594238No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT18340.49292462338569876No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG17360.4665851396933331No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG11300.3037103731874807No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA10860.29188448255009203No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA9190.24699985217636702No Hit
AAAAAACTGCCAGCAGGTGGTCGCCTGCCGG8570.23033609718731943No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8080.2171663553411366No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA7180.1929770335828417No Hit
GCGGTGGCAGAAAAACTGCGTACCAAATGGG6320.16986279279158212No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6190.1663687796487173No Hit
GGCGCCGCAGGCGATGGCGACGGTGGCGGTT5520.14836117345087552No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT5240.1408356066816282No Hit
GAACCGATCTACGCTACCATCGACGACCTGG5090.13680405305524573No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4980.13384758039589859No Hit
ATGGCACGTCGCCTGCCGAAACCGACTCTGC4720.12685955411016892No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC4600.12363431120906293No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC4550.12229046000026876No Hit
GTGAACGCAAAAATTGATCGCCTGAACCAGA4480.12040906830795693No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT4050.10885194791232715No Hit

[OK]Adapter Content

Adapter graph