FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007942266

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007942266
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences526599
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9670.18363118805770615No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9550.18135241426588353No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG8660.1644515086431991No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7400.14052438382906157No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7040.13368806245359371No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG6740.12799112797403717No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5620.10672257258369272No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)